If more than 50 genes/sequences are provided as input, then the associated running time can take some time. Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes. After processing you will be send an email with a link to the created phylogenetic tree.
The selection modi are exclusive: please choose either Gene selection or Species selection.
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ) $local_species = 'acertr' $disabled = '' $selected = ''include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";
$selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";
$num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 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'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ) $local_species = 'acertr' $disabled = '' $selected = ''
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 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=> 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ) $local_species = 'ach' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ) $local_species = 'ach' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ) $local_species = 'aar' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ) $local_species = 'aar' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ) $local_species = 'amhyb' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 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'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 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'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ) $local_species = 'amhyb' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 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=> 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ) $local_species = 'atr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ) $local_species = 'atr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ) $local_species = 'aox' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ) $local_species = 'aox' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ) $local_species = 'aly' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 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'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 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'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ) $local_species = 'aly' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 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=> 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ) $local_species = 'ath' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ) $local_species = 'ath' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ) $local_species = 'arhy' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ) $local_species = 'arhy' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ) $local_species = 'ama' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 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'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 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'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ) $local_species = 'ama' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 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=> 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ) $local_species = 'bvu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ) $local_species = 'bvu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ) $local_species = 'bca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ) $local_species = 'bca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ) $local_species = 'bna' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 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'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 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'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ) $local_species = 'bna' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 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=> 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ) $local_species = 'bol' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ) $local_species = 'bol' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ) $local_species = 'bra' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ) $local_species = 'bra' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ) $local_species = 'camsi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 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'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 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'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ) $local_species = 'camsi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 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=> 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ) $local_species = 'cansat' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ) $local_species = 'cansat' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ) $local_species = 'cru' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ) $local_species = 'cru' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ) $local_species = 'can' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 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'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 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'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ) $local_species = 'can' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 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=> 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ) $local_species = 'chi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ) $local_species = 'chi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ) $local_species = 'cpa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ) $local_species = 'cpa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ) $local_species = 'cfa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 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'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 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'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ) $local_species = 'cfa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 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=> 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ) $local_species = 'cil' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ) $local_species = 'cil' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ) $local_species = 'cde' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ) $local_species = 'cde' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ) $local_species = 'cqu' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 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'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 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'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ) $local_species = 'cqu' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 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=> 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ) $local_species = 'car' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ) $local_species = 'car' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ) $local_species = 'cla' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ) $local_species = 'cla' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ) $local_species = 'ccl' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 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'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 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'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ) $local_species = 'ccl' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 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=> 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ) $local_species = 'ccan' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ) $local_species = 'ccan' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ) $local_species = 'col' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ) $local_species = 'col' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ) $local_species = 'cav' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 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'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 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'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ) $local_species = 'cav' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 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=> 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ) $local_species = 'cme' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ) $local_species = 'cme' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ) $local_species = 'csa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ) $local_species = 'csa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ) $local_species = 'dca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 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'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 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'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ) $local_species = 'dca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 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=> 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ) $local_species = 'din' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ) $local_species = 'din' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ) $local_species = 'dzi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ) $local_species = 'dzi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ) $local_species = 'eca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 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'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 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'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ) $local_species = 'eca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 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=> 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ) $local_species = 'egut' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ) $local_species = 'egut' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ) $local_species = 'egr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ) $local_species = 'egr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ) $local_species = 'esa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 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'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 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'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ) $local_species = 'esa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 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=> 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ) $local_species = 'fve' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ) $local_species = 'fve' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ) $local_species = 'fan' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ) $local_species = 'fan' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ) $local_species = 'gma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 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'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 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'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ) $local_species = 'gma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 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=> 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ) $local_species = 'ghi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ) $local_species = 'ghi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ) $local_species = 'gra' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ) $local_species = 'gra' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ) $local_species = 'han' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 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'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 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'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ) $local_species = 'han' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 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=> 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ) $local_species = 'hma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ) $local_species = 'hma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ) $local_species = 'lsa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ) $local_species = 'lsa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ) $local_species = 'lonja' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 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'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 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'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ) $local_species = 'lonja' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 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=> 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ) $local_species = 'lja' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ) $local_species = 'lja' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ) $local_species = 'lal' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ) $local_species = 'lal' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ) $local_species = 'mbi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 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'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 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'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ) $local_species = 'mbi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 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=> 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ) $local_species = 'mdo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ) $local_species = 'mdo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ) $local_species = 'mes' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ) $local_species = 'mes' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ) $local_species = 'mtr' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 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'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 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'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ) $local_species = 'mtr' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 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=> 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ) $local_species = 'nnu' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ) $local_species = 'nnu' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ) $local_species = 'nta' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ) $local_species = 'nta' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ) $local_species = 'oeu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 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'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 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'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ) $local_species = 'oeu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 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=> 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ) $local_species = 'osa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ) $local_species = 'osa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ) $local_species = 'pso' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ) $local_species = 'pso' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ) $local_species = 'pax' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 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'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 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'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ) $local_species = 'pax' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 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=> 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ) $local_species = 'pvu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ) $local_species = 'pvu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ) $local_species = 'psa' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ) $local_species = 'psa' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ) $local_species = 'ptr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 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'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 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'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ) $local_species = 'ptr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 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=> 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ) $local_species = 'ppe' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ) $local_species = 'ppe' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ) $local_species = 'pgr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ) $local_species = 'pgr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ) $local_species = 'qlo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 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'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 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'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ) $local_species = 'qlo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 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=> 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ) $local_species = 'rsi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ) $local_species = 'rsi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ) $local_species = 'rch' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ) $local_species = 'rch' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ) $local_species = 'sbr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 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'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 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'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ) $local_species = 'sbr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 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=> 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ) $local_species = 'sbo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ) $local_species = 'sbo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ) $local_species = 'shi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ) $local_species = 'shi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ) $local_species = 'spa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 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'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 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'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ) $local_species = 'spa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 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=> 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ) $local_species = 'sed' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ) $local_species = 'sed' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ) $local_species = 'sgi' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ) $local_species = 'sgi' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ) $local_species = 'sci' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 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'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 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'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ) $local_species = 'sci' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 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=> 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ) $local_species = 'sly' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ) $local_species = 'sly' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ) $local_species = 'spe' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ) $local_species = 'spe' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ) $local_species = 'stu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 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'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 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'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ) $local_species = 'stu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 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=> 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ) $local_species = 'sas' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ) $local_species = 'sas' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ) $local_species = 'tha' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ) $local_species = 'tha' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ) $local_species = 'tca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 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'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 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'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ) $local_species = 'tca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 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=> 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ) $local_species = 'tpr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ) $local_species = 'tpr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ) $local_species = 'twi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ) $local_species = 'twi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ) $local_species = 'tar' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 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'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 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'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ) $local_species = 'tar' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 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=> 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ) $local_species = 'ugi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ) $local_species = 'ugi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ) $local_species = 'vma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ) $local_species = 'vma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ) $local_species = 'vpl' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 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'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 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'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ) $local_species = 'vpl' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 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=> 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ) $local_species = 'vmu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ) $local_species = 'vmu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ) $local_species = 'vvi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ) $local_species = 'vvi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) $local_species = 'zma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 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'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 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'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ), 'gf_id' => 'HOM05D000497', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000497' ), 'data_identifier' => 'HOM05D000497', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000497', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1068', 'num_species' => '91' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15100' => 'bna', 'A01p19350' => 'bna', 'A02p11160' => 'bna', 'A02p15150' => 'bna', 'A02p17190' => 'bna', 'A02p34150' => 'bna', 'A03p15220' => 'bna', 'A03p29130' => 'bna', 'A03p54730' => 'bna', 'A03p57610' => 'bna', 'A05p01490' => 'bna', 'A06p42400' => 'bna', 'A07p14120' => 'bna', 'A07p25640' => 'bna', 'A07p30850' => 'bna', 'A07p31970' => 'bna', 'A07p34940' => 'bna', 'A08p20280' => 'bna', 'A08p28390' => 'bna', 'A09p39470' => 'bna', 'A09p53700' => 'bna', 'A10p10810' => 'bna', 'Aa31LG10G15370' => 'aar', 'Aa31LG10G4860' => 'aar', 'Aa31LG1G27680' => 'aar', 'Aa31LG2G1280' => 'aar', 'Aa31LG2G6460' => 'aar', 'Aa31LG3G9240' => 'aar', 'Aa31LG4G9360' => 'aar', 'Aa31LG6G6990' => 'aar', 'Aa31LG7G11250' => 'aar', 'Aa31LG7G6990' => 'aar', 'Aa31LG7G9040' => 'aar', 'Aa31LG9G11040' => 'aar', 'Aa31sc621G10' => 'aar', 'Actinidia01401' => 'ach', 'Actinidia03155' => 'ach', 'Actinidia04217' => 'ach', 'Actinidia08622' => 'ach', 'Actinidia11629' => 'ach', 'Actinidia13662' => 'ach', 'Actinidia14886' => 'ach', 'Actinidia16648' => 'ach', 'Actinidia23158' => 'ach', 'Actinidia27342' => 'ach', 'Actinidia31862' => 'ach', 'Actinidia38372' => 'ach', 'Actinidia39827' => 'ach', 'Ah.03g137720' => 'amhyb', 'Ah.05g179900' => 'amhyb', 'Ah.07g197090' => 'amhyb', 'Ah.07g206070' => 'amhyb', 'Ah.08g221430' => 'amhyb', 'Ah.13g069820' => 'amhyb', 'AL1G36550' => 'aly', 'AL1G39830' => 'aly', 'AL1G55980' => 'aly', 'AL2G27450' => 'aly', 'AL2G30710' => 'aly', 'AL4G45610' => 'aly', 'AL5G14542' => 'aly', 'AL5G44020' => 'aly', 'AL6G45320' => 'aly', 'AL7G24690' => 'aly', 'AL7G29600' => 'aly', 'AL8G27990' => 'aly', 'Aqoxy2G02063' => 'aox', 'Aqoxy3G00313' => 'aox', 'Aqoxy4G03292' => 'aox', 'Aqoxy5G04110' => 'aox', 'Aqoxy7G00163' => 'aox', 'Aqoxy7G00164' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3WAX0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0YQ1S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6K2KY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4EN9H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q66BD2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VG3SGX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y7XFN8' => 'arhy', 'AT1G22985' => 'ath', 'AT1G25470' => 'ath', 'AT1G49120' => 'ath', 'AT1G68550' => 'ath', 'AT1G71130' => 'ath', 'AT2G46310' => 'ath', 'AT3G25890' => 'ath', 'AT3G61630' => 'ath', 'AT4G11140' => 'ath', 'AT4G23750' => 'ath', 'AT4G27950' => 'ath', 'AT5G53290' => 'ath', 'ATR1093G005' => 'atr', 'ATR1127G126' => 'atr', 'Atru.chr1.280' => 'acertr', 'Atru.chr10.2341' => 'acertr', 'Atru.chr11.1270' => 'acertr', 'Atru.chr3.540' => 'acertr', 'Atru.chr3.542' => 'acertr', 'Atru.chr3.543' => 'acertr', 'Atru.chr5.618' => 'acertr', 'Atru.chr9.2058' => 'acertr', 'Atru.chr9.831' => 'acertr', 'AUR62004449' => 'cqu', 'AUR62010799' => 'cqu', 'AUR62019798' => 'cqu', 'AUR62021049' => 'cqu', 'AUR62023501' => 'cqu', 'AUR62031484' => 'cqu', 'AUR62034343' => 'cqu', 'AUR62035238' => 'cqu', 'AUR62038727' => 'cqu', 'BcaB01g02711' => 'bca', 'BcaB01g03226' => 'bca', 'BcaB01g03230' => 'bca', 'BcaB01g04240' => 'bca', 'BcaB01g04779' => 'bca', 'BcaB02g07364' => 'bca', 'BcaB03g11919' => 'bca', 'BcaB03g12548' => 'bca', 'BcaB03g14177' => 'bca', 'BcaB03g15592' => 'bca', 'BcaB03g15820' => 'bca', 'BcaB05g22030' => 'bca', 'BcaB05g24395' => 'bca', 'BcaB05g24646' => 'bca', 'BcaB07g30249' => 'bca', 'BcaB07g31899' => 'bca', 'BcaB08g35689' => 'bca', 'BcaC01g04640' => 'bca', 'BcaC01g05078' => 'bca', 'BcaC01g06239' => 'bca', 'BcaC03g14435' => 'bca', 'BcaC03g14436' => 'bca', 'BcaC03g14437' => 'bca', 'BcaC03g14964' => 'bca', 'BcaC03g15269' => 'bca', 'BcaC03g17304' => 'bca', 'BcaC04g20476' => 'bca', 'BcaC04g21475' => 'bca', 'BcaC05g26450' => 'bca', 'BcaC05g26659' => 'bca', 'BcaC06g31107' => 'bca', 'BcaC06g32655' => 'bca', 'BcaC06g33942' => 'bca', 'BcaC06g35007' => 'bca', 'BcaC07g38301' => 'bca', 'BcaC07g39181' => 'bca', 'BcaC07g40675' => 'bca', 'BcaC08g45144' => 'bca', 'BcaC08g45791' => 'bca', 'BcaC09g50524' => 'bca', 'BcaC09g50948' => 'bca', 'BcaNung01084' => 'bca', 'BcaNung01607' => 'bca', 'BcaNung03190' => 'bca', 'BcaNung03191' => 'bca', 'BcaNung05925' => 'bca', 'BolC1t01824H' => 'bol', 'BolC1t02387H' => 'bol', 'BolC2t07990H' => 'bol', 'BolC2t08581H' => 'bol', 'BolC2t08907H' => 'bol', 'BolC2t11327H' => 'bol', 'BolC3t14185H' => 'bol', 'BolC3t15396H' => 'bol', 'BolC3t15848H' => 'bol', 'BolC4t21821H' => 'bol', 'BolC5t31229H' => 'bol', 'BolC6t37932H' => 'bol', 'BolC6t38700H' => 'bol', 'BolC6t38858H' => 'bol', 'BolC6t39286H' => 'bol', 'BolC7t42610H' => 'bol', 'BolC7t44025H' => 'bol', 'BolC7t45805H' => 'bol', 'BolC7t46061H' => 'bol', 'BolC8t48729H' => 'bol', 'BolC8t49809H' => 'bol', 'BolC8t51231H' => 'bol', 'BolC9t55995H' => 'bol', 'BolC9t57181H' => 'bol', 'BraA01t01448Z' => 'bra', 'BraA01t01876Z' => 'bra', 'BraA02t06179Z' => 'bra', 'BraA02t06580Z' => 'bra', 'BraA02t06765Z' => 'bra', 'BraA02t08430Z' => 'bra', 'BraA03t10815Z' => 'bra', 'BraA03t12107Z' => 'bra', 'BraA03t14541Z' => 'bra', 'BraA03t14828Z' => 'bra', 'BraA05t19145Z' => 'bra', 'BraA06t27155Z' => 'bra', 'BraA07t29170Z' => 'bra', 'BraA07t30205Z' => 'bra', 'BraA07t30722Z' => 'bra', 'BraA07t30826Z' => 'bra', 'BraA07t31312Z' => 'bra', 'BraA08t33987Z' => 'bra', 'BraA08t34769Z' => 'bra', 'BraA09t40792Z' => 'bra', 'BraA10t43165Z' => 'bra', 'C01p18980' => 'bna', 'C01p24410' => 'bna', 'C02p18490' => 'bna', 'C02p24880' => 'bna', 'C02p52510' => 'bna', 'C03p17780' => 'bna', 'C03p30480' => 'bna', 'C03p35360' => 'bna', 'C04p01690' => 'bna', 'C05p24970' => 'bna', 'C06p27630' => 'bna', 'C06p35760' => 'bna', 'C06p37550' => 'bna', 'C06p41370' => 'bna', 'C07p20780' => 'bna', 'C07p34930' => 'bna', 'C07p53070' => 'bna', 'C07p55820' => 'bna', 'C08p10470' => 'bna', 'C08p21710' => 'bna', 'C08p36480' => 'bna', 'C09p31370' => 'bna', 'C09p43100' => 'bna', 'CAN.G108.20' => 'can', 'CAN.G201.6' => 'can', 'CAN.G379.10' => 'can', 'CAN.G379.11' => 'can', 'CAN.G379.12' => 'can', 'CAN.G379.13' => 'can', 'CAN.G379.14' => 'can', 'CAN.G379.15' => 'can', 'CAN.G379.17' => 'can', 'CAN.G379.18' => 'can', 'CAN.G379.19' => 'can', 'CAN.G379.3' => 'can', 'CAN.G379.4' => 'can', 'CAN.G379.5' => 'can', 'CAN.G379.6' => 'can', 'CAN.G379.7' => 'can', 'CAN.G379.8' => 'can', 'CAN.G379.9' => 'can', 'CAN.G438.135' => 'can', 'CAN.G532.90' => 'can', 'CAN.G589.15' => 'can', 'CAN.G64.7' => 'can', 'CAN.G64.8' => 'can', 'CAN.G656.14' => 'can', 'CAN.G874.70' => 'can', 'CAN.G986.47' => 'can', 'CANSAT01G0626' => 'cansat', 'CANSAT21G0646' => 'cansat', 'CANSAT21G1394' => 'cansat', 'CANSAT54G2182' => 'cansat', 'CANSAT56G2093' => 'cansat', 'CARHR023360' => 'chi', 'CARHR061340' => 'chi', 'CARHR064420' => 'chi', 'CARHR141590' => 'chi', 'CARHR146860' => 'chi', 'CARHR171960' => 'chi', 'CARHR231150' => 'chi', 'CARHR235640' => 'chi', 'CARHR255440' => 'chi', 'CARHR266330' => 'chi', 'Carub.0001s2248' => 'cru', 'Carub.0001s2502' => 'cru', 'Carub.0002s1506' => 'cru', 'Carub.0002s1795' => 'cru', 'Carub.0004s2901' => 'cru', 'Carub.0005s0372' => 'cru', 'Carub.0005s2832' => 'cru', 'Carub.0006s2996' => 'cru', 'Carub.0007s1288' => 'cru', 'Carub.0007s1736' => 'cru', 'Carub.0008s1347' => 'cru', 'Ca_05723_v3' => 'car', 'Ca_11177_v3' => 'car', 'Ca_11804_v3' => 'car', 'Ca_15069_v3' => 'car', 'Ca_16671_v3' => 'car', 'Ca_17499_v3' => 'car', 'Ca_20705_v3' => 'car', 'Ca_23164_v3' => 'car', 'Ca_24524_v3' => 'car', 'Ca_25450_v3' => 'car', 'Cc01_g15370' => 'ccan', 'Cc02_g01940' => 'ccan', 'Cc02_g38950' => 'ccan', 'Cc08_g15690' => 'ccan', 'Cc11_g10210' => 'ccan', 'CDE02G4115' => 'cde', 'CDE03G0174' => 'cde', 'CDE04G2923' => 'cde', 'CDE06G1724' => 'cde', 'CDE07G1196' => 'cde', 'CDE07G1805' => 'cde', 'CDE09G0411' => 'cde', 'CDE10G0870' => 'cde', 'CDE10G1368' => 'cde', 'Cfa003836' => 'cfa', 'Cfa011844' => 'cfa', 'Cfa012689' => 'cfa', 'Cfa012853' => 'cfa', 'Cfa016357' => 'cfa', 'Cfa018601' => 'cfa', 'Cfa019784' => 'cfa', 'Ciclev10002183m.g' => 'ccl', 'Ciclev10005220m.g' => 'ccl', 'Ciclev10020886m.g' => 'ccl', 'Ciclev10021073m.g' => 'ccl', 'Ciclev10021422m.g' => 'ccl', 'Ciclev10032059m.g' => 'ccl', 'CiPaw.01G071800' => 'cil', 'CiPaw.02G038500' => 'cil', 'CiPaw.05G258400' => 'cil', 'CiPaw.06G007000' => 'cil', 'CiPaw.11G124700' => 'cil', 'CiPaw.12G085600' => 'cil', 'CiPaw.13G062600' => 'cil', 'CiPaw.14G049500' => 'cil', 'CiPaw.15G084300' => 'cil', 'CiPaw.15G129900' => 'cil', 'CiPaw.16G064700' => 'cil', 'ClCG01G000610' => 'cla', 'ClCG01G002080' => 'cla', 'ClCG02G018970' => 'cla', 'ClCG05G001070' => 'cla', 'ClCG05G008650' => 'cla', 'ClCG05G022760' => 'cla', 'ClCG07G014840' => 'cla', 'ClCG08G003830' => 'cla', 'ClCG08G005320' => 'cla', 'COL.COLO4_05976' => 'col', 'COL.COLO4_06335' => 'col', 'COL.COLO4_07919' => 'col', 'COL.COLO4_21270' => 'col', 'COL.COLO4_34151' => 'col', 'COL.COLO4_34152' => 'col', 'COL.COLO4_35667' => 'col', 'Cpa.g.c44597' => 'cpa', 'Cpa.g.sc1.178' => 'cpa', 'Cpa.g.sc122.27' => 'cpa', 'Cpa.g.sc194.13' => 'cpa', 'Cpa.g.sc2.277' => 'cpa', 'Cpa.g.sc3.43' => 'cpa', 'CsaV3_1G006600' => 'csa', 'CsaV3_3G008400' => 'csa', 'CsaV3_3G021840' => 'csa', 'CsaV3_4G006370' => 'csa', 'CsaV3_5G000710' => 'csa', 'CsaV3_5G002210' => 'csa', 'CsaV3_5G034270' => 'csa', 'CsaV3_6G003510' => 'csa', 'CsaV3_6G003960' => 'csa', 'CsaV3_6G013210' => 'csa', 'CSS0005103' => 'camsi', 'CSS0011138' => 'camsi', 'CSS0014988' => 'camsi', 'CSS0021582' => 'camsi', 'CSS0037642' => 'camsi', 'CSS0041141' => 'camsi', 'CSS0042316' => 'camsi', 'DCAR_003079' => 'dca', 'DCAR_005023' => 'dca', 'DCAR_007241' => 'dca', 'DCAR_008538' => 'dca', 'DCAR_008908' => 'dca', 'DCAR_010628' => 'dca', 'DCAR_011542' => 'dca', 'DCAR_018576' => 'dca', 'DCAR_020298' => 'dca', 'DCAR_021563' => 'dca', 'DCAR_022156' => 'dca', 'DCAR_023661' => 'dca', 'DCAR_025238' => 'dca', 'DCAR_027724' => 'dca', 'Dinv04472' => 'din', 'Dinv09800' => 'din', 'Dinv21092' => 'din', 'Dinv21093' => 'din', 'Dinv28094' => 'din', 'Dinv28119' => 'din', 'Dinv28342' => 'din', 'Dinv28744' => 'din', 'Dinv31642' => 'din', 'Dinv32552' => 'din', 'Dinv35302' => 'din', 'Dinv37558' => 'din', 'Dinv38866' => 'din', 'Duzib068G0141' => 'dzi', 'Duzib084G0085' => 'dzi', 'Duzib084G0480' => 'dzi', 'Duzib084G0902' => 'dzi', 'Duzib133G1167' => 'dzi', 'Duzib138G1366' => 'dzi', 'Duzib168G0214' => 'dzi', 'Duzib205G0982' => 'dzi', 'Duzib205G1113' => 'dzi', 'Duzib213G0615' => 'dzi', 'Duzib251G0520' => 'dzi', 'Duzib268G0339' => 'dzi', 'ECA233G0051' => 'eca', 'ECA233G2743' => 'eca', 'ECA233G5103' => 'eca', 'ECA234G0409' => 'eca', 'ECA236G1352' => 'eca', 'ECA236G5041' => 'eca', 'ECA238G2529' => 'eca', 'ECA240G4113' => 'eca', 'ECA246G1557' => 'eca', 'ECA246G1887' => 'eca', 'ECA247G1047' => 'eca', 'ECA248G1489' => 'eca', 'EL10Ac1g00315' => 'bvu', 'EL10Ac3g05354' => 'bvu', 'EL10Ac5g12873' => 'bvu', 'Eucgr.A02669' => 'egr', 'Eucgr.B00720' => 'egr', 'Eucgr.D01775' => 'egr', 'Eucgr.D02344' => 'egr', 'Eucgr.E00834' => 'egr', 'Eucgr.G02326' => 'egr', 'Eucgr.K00321' => 'egr', 'FAN01G0160' => 'fan', 'FAN01G0292' => 'fan', 'FAN03G2089' => 'fan', 'FAN03G2977' => 'fan', 'FAN04G0750' => 'fan', 'FAN04G1687' => 'fan', 'FAN06G0940' => 'fan', 'FAN06G2519' => 'fan', 'FAN06G3373' => 'fan', 'FAN06G4388' => 'fan', 'FAN07G1058' => 'fan', 'FAN07G1370' => 'fan', 'FAN07G1594' => 'fan', 'FAN08G1813' => 'fan', 'FAN08G2020' => 'fan', 'FAN08G3491' => 'fan', 'FAN10G0912' => 'fan', 'FAN10G1432' => 'fan', 'FAN10G1872' => 'fan', 'FAN10G3056' => 'fan', 'FAN11G0456' => 'fan', 'FAN12G3832' => 'fan', 'FAN13G0092' => 'fan', 'FAN13G0894' => 'fan', 'FAN13G1432' => 'fan', 'FAN13G2981' => 'fan', 'FAN13G3183' => 'fan', 'FAN16G0193' => 'fan', 'FAN17G2407' => 'fan', 'FAN18G0532' => 'fan', 'FAN18G2719' => 'fan', 'FAN21G2610' => 'fan', 'FAN25G3436' => 'fan', 'FvH4_3g40810' => 'fve', 'FvH4_4g10820' => 'fve', 'FvH4_4g27491' => 'fve', 'FvH4_5g03840' => 'fve', 'FvH4_5g03920' => 'fve', 'FvH4_5g12250' => 'fve', 'FvH4_7g15860' => 'fve', 'FvH4_7g30930' => 'fve', 'Glyma.01G081100' => 'gma', 'Glyma.01G224100' => 'gma', 'Glyma.02G236800' => 'gma', 'Glyma.03G094700' => 'gma', 'Glyma.03G255500' => 'gma', 'Glyma.04G238700' => 'gma', 'Glyma.05G214400' => 'gma', 'Glyma.06G125100' => 'gma', 'Glyma.08G020900' => 'gma', 'Glyma.08G040900' => 'gma', 'Glyma.08G149200' => 'gma', 'Glyma.08G261500' => 'gma', 'Glyma.10G175050' => 'gma', 'Glyma.10G274600' => 'gma', 'Glyma.11G019000' => 'gma', 'Glyma.11G199300' => 'gma', 'Glyma.13G040400' => 'gma', 'Glyma.14G123900' => 'gma', 'Glyma.14G205600' => 'gma', 'Glyma.16G079600' => 'gma', 'Glyma.17G170100' => 'gma', 'Glyma.18G051500' => 'gma', 'Glyma.19G253100' => 'gma', 'Glyma.20G115300' => 'gma', 'Glyma.20G215700' => 'gma', 'Gohir.A02G102501' => 'ghi', 'Gohir.A04G048200' => 'ghi', 'Gohir.A07G139800' => 'ghi', 'Gohir.A08G097550' => 'ghi', 'Gohir.A09G183600' => 'ghi', 'Gohir.A09G191000' => 'ghi', 'Gohir.A11G094400' => 'ghi', 'Gohir.A11G094500' => 'ghi', 'Gohir.A12G110666' => 'ghi', 'Gohir.A12G167300' => 'ghi', 'Gohir.A12G231400' => 'ghi', 'Gohir.A12G252200' => 'ghi', 'Gohir.A12G266351' => 'ghi', 'Gohir.A13G055300' => 'ghi', 'Gohir.D03G081400' => 'ghi', 'Gohir.D05G331800' => 'ghi', 'Gohir.D07G145000' => 'ghi', 'Gohir.D08G132800' => 'ghi', 'Gohir.D09G178300' => 'ghi', 'Gohir.D09G185500' => 'ghi', 'Gohir.D11G099400' => 'ghi', 'Gohir.D11G099500' => 'ghi', 'Gohir.D12G113900' => 'ghi', 'Gohir.D12G170700' => 'ghi', 'Gohir.D12G235600' => 'ghi', 'Gohir.D12G253300' => 'ghi', 'Gohir.D12G266750' => 'ghi', 'Gohir.D13G066800' => 'ghi', 'Gorai.001G156900' => 'gra', 'Gorai.003G082200' => 'gra', 'Gorai.004G135700' => 'gra', 'Gorai.006G200400' => 'gra', 'Gorai.006G208200' => 'gra', 'Gorai.007G105600' => 'gra', 'Gorai.007G105700' => 'gra', 'Gorai.008G123400' => 'gra', 'Gorai.008G183300' => 'gra', 'Gorai.008G252300' => 'gra', 'Gorai.008G271200' => 'gra', 'Gorai.008G286700' => 'gra', 'Gorai.009G355700' => 'gra', 'Gorai.013G076100' => 'gra', 'GSVIVG01011902001' => 'vvi', 'HanXRQChr01g0012731' => 'han', 'HanXRQChr02g0039841' => 'han', 'HanXRQChr02g0048251' => 'han', 'HanXRQChr04g0121031' => 'han', 'HanXRQChr07g0191121' => 'han', 'HanXRQChr07g0207151' => 'han', 'HanXRQChr08g0213831' => 'han', 'HanXRQChr08g0230231' => 'han', 'HanXRQChr10g0292681' => 'han', 'HanXRQChr13g0392851' => 'han', 'HanXRQChr14g0462771' => 'han', 'HanXRQChr15g0476341' => 'han', 'HanXRQChr15g0481061' => 'han', 'HanXRQChr16g0529281' => 'han', 'HanXRQChr17g0535351' => 'han', 'HanXRQChr17g0552041' => 'han', 'HanXRQChr17g0567481' => 'han', 'Haze_00105' => 'cav', 'Haze_08685' => 'cav', 'Haze_15617' => 'cav', 'Haze_17476' => 'cav', 'Haze_18665' => 'cav', 'Haze_18667' => 'cav', 'Haze_24480' => 'cav', 'Hma1.2p1_0061F.1_g033990' => 'hma', 'Hma1.2p1_0061F.1_g034010' => 'hma', 'Hma1.2p1_0161F.1_g072100' => 'hma', 'Hma1.2p1_0327F.1_g126700' => 'hma', 'Hma1.2p1_0359F.1_g135450' => 'hma', 'Hma1.2p1_0384F.1_g141040' => 'hma', 'Hma1.2p1_0592F.1_g185350' => 'hma', 'Hma1.2p1_0952F.1_g240855' => 'hma', 'HPP92_000614' => 'vpl', 'HPP92_003986' => 'vpl', 'HPP92_004821' => 'vpl', 'HPP92_006393' => 'vpl', 'HPP92_006688' => 'vpl', 'HPP92_007542' => 'vpl', 'HPP92_017501' => 'vpl', 'HPP92_020142' => 'vpl', 'HPP92_024017' => 'vpl', 'HPP92_024984' => 'vpl', 'Lalb_Chr02g0146021' => 'lal', 'Lalb_Chr04g0251721' => 'lal', 'Lalb_Chr04g0254741' => 'lal', 'Lalb_Chr05g0211641' => 'lal', 'Lalb_Chr05g0224291' => 'lal', 'Lalb_Chr06g0166131' => 'lal', 'Lalb_Chr08g0240641' => 'lal', 'Lalb_Chr09g0320711' => 'lal', 'Lalb_Chr10g0099991' => 'lal', 'Lalb_Chr10g0103821' => 'lal', 'Lalb_Chr17g0342111' => 'lal', 'Lalb_Chr20g0117271' => 'lal', 'Lalb_Chr21g0308961' => 'lal', 'Lalb_Chr23g0271441' => 'lal', 'Lj1g0004830' => 'lja', 'Lj1g0016537' => 'lja', 'Lj1P1012T53' => 'lonja', 'Lj2g0001611' => 'lja', 'Lj2g0013467' => 'lja', 'Lj2P1103T21' => 'lonja', 'Lj2P172T25' => 'lonja', 'Lj3E1016G0' => 'lonja', 'Lj3g0006037' => 'lja', 'Lj3g0020914' => 'lja', 'Lj3P911T16' => 'lonja', 'Lj4g0009336' => 'lja', 'Lj5g0018780' => 'lja', 'Lj6C759T21' => 'lonja', 'Lj6g0015832' => 'lja', 'Lj8P211T8' => 'lonja', 'Lj8P330T15' => 'lonja', 'Lj9P592T60' => 'lonja', 'LjContig00141g0000331' => 'lja', 'LjContig00312_ERROPOS870357g0027833' => 'lja', 'LjContig00564g0001424' => 'lja', 'Lsat_1_v5_gn_2_134301' => 'lsa', 'Lsat_1_v5_gn_3_10000' => 'lsa', 'Lsat_1_v5_gn_3_59341' => 'lsa', 'Lsat_1_v5_gn_3_59401' => 'lsa', 'Lsat_1_v5_gn_4_17901' => 'lsa', 'Lsat_1_v5_gn_5_177360' => 'lsa', 'Lsat_1_v5_gn_6_11860' => 'lsa', 'Lsat_1_v5_gn_6_85941' => 'lsa', 'Lsat_1_v5_gn_7_1840' => 'lsa', 'Lsat_1_v5_gn_8_39481' => 'lsa', 'Lsat_1_v5_gn_8_5781' => 'lsa', 'Lsat_1_v5_gn_8_99561' => 'lsa', 'Lsat_1_v5_gn_9_13601' => 'lsa', 'Manes.01G012200' => 'mes', 'Manes.01G046200' => 'mes', 'Manes.01G249600' => 'mes', 'Manes.02G013200' => 'mes', 'Manes.05G026200' => 'mes', 'Manes.05G120878' => 'mes', 'Manes.06G068900' => 'mes', 'Manes.06G156400' => 'mes', 'Manes.14G019032' => 'mes', 'Manes.14G101900' => 'mes', 'Manes.18G125700' => 'mes', 'MBI06_g02235_MAGBIO' => 'mbi', 'MBI07_g20441_MAGBIO' => 'mbi', 'MBI15_g32285_MAGBIO' => 'mbi', 'MD01G1075400' => 'mdo', 'MD01G1214500' => 'mdo', 'MD03G1049900' => 'mdo', 'MD06G1100500' => 'mdo', 'MD06G1215500' => 'mdo', 'MD07G1284200' => 'mdo', 'MD09G1161000' => 'mdo', 'MD11G1052100' => 'mdo', 'MD13G1042600' => 'mdo', 'MD14G1120000' => 'mdo', 'MD14G1226300' => 'mdo', 'MD16G1043500' => 'mdo', 'MD17G1146800' => 'mdo', 'Medtr1g028560' => 'mtr', 'Medtr1g050435' => 'mtr', 'Medtr1g105400' => 'mtr', 'Medtr1g110970' => 'mtr', 'Medtr3g062440' => 'mtr', 'Medtr3g090760' => 'mtr', 'Medtr5g009620' => 'mtr', 'Medtr5g057647' => 'mtr', 'Medtr5g057810' => 'mtr', 'Medtr5g075570' => 'mtr', 'Medtr6g004390' => 'mtr', 'Medtr6g025490' => 'mtr', 'Medtr8g010340' => 'mtr', 'Medtr8g023680' => 'mtr', 'Medtr8g099215' => 'mtr', 'MELO3C002085.2' => 'cme', 'MELO3C005734.2' => 'cme', 'MELO3C005867.2' => 'cme', 'MELO3C006059.2' => 'cme', 'MELO3C006973.2' => 'cme', 'MELO3C011572.2' => 'cme', 'MELO3C011671.2' => 'cme', 'MELO3C012242.2' => 'cme', 'MELO3C016313.2' => 'cme', 'MELO3C019590.2' => 'cme', 'Migut.A00686' => 'egut', 'Migut.B01832' => 'egut', 'Migut.D00812' => 'egut', 'Migut.E00335' => 'egut', 'Migut.E01228' => 'egut', 'Migut.F00247' => 'egut', 'Migut.F01056' => 'egut', 'Migut.L01068' => 'egut', 'MSTRG.11938' => 'ama', 'MSTRG.13528' => 'ama', 'MSTRG.13871' => 'ama', 'MSTRG.1824' => 'ama', 'MSTRG.18536' => 'ama', 'MSTRG.21258' => 'ama', 'MSTRG.2238' => 'ama', 'MSTRG.27587' => 'ama', 'MSTRG.63' => 'ama', 'MSTRG.7670' => 'ama', 'MSTRG.833' => 'ama', 'MSTRG.8492' => 'ama', 'MSTRG.8681' => 'ama', 'Nitab4.5_0000015g0020' => 'nta', 'Nitab4.5_0000057g0300' => 'nta', 'Nitab4.5_0000105g0290' => 'nta', 'Nitab4.5_0000223g0100' => 'nta', 'Nitab4.5_0000305g0140' => 'nta', 'Nitab4.5_0000472g0020' => 'nta', 'Nitab4.5_0000586g0010' => 'nta', 'Nitab4.5_0000718g0160' => 'nta', 'Nitab4.5_0000874g0120' => 'nta', 'Nitab4.5_0000974g0030' => 'nta', 'Nitab4.5_0002902g0060' => 'nta', 'Nitab4.5_0003330g0070' => 'nta', 'Nitab4.5_0004161g0090' => 'nta', 'Nitab4.5_0005886g0010' => 'nta', 'Nitab4.5_0005888g0010' => 'nta', 'Nitab4.5_0006400g0020' => 'nta', 'Nitab4.5_0007730g0010' => 'nta', 'Nitab4.5_0009142g0010' => 'nta', 'Nitab4.5_0011338g0010' => 'nta', 'Nitab4.5_0012460g0010' => 'nta', 'Nn1g01791' => 'nnu', 'Nn1g04352' => 'nnu', 'Nn5g26815' => 'nnu', 'Nn6g33477' => 'nnu', 'Nn7g37379' => 'nnu', 'Oeu007844.1' => 'oeu', 'Oeu009944.1' => 'oeu', 'Oeu011393.1' => 'oeu', 'Oeu011810.1' => 'oeu', 'Oeu013435.1' => 'oeu', 'Oeu014305.1' => 'oeu', 'Oeu024465.1' => 'oeu', 'Oeu027683.1' => 'oeu', 'Oeu035422.1' => 'oeu', 'Oeu036890.1' => 'oeu', 'Oeu037110.1' => 'oeu', 'Oeu037111.1' => 'oeu', 'Oeu039505.1' => 'oeu', 'Oeu043864.1' => 'oeu', 'Oeu049098.1' => 'oeu', 'Oeu054039.1' => 'oeu', 'Oeu060970.1' => 'oeu', 'Os01g0224100' => 'osa', 'Os01g0657400' => 'osa', 'Os05g0316800' => 'osa', 'Os09g0309700' => 'osa', 'Peaxi162Scf00015g00091' => 'pax', 'Peaxi162Scf00050g00086' => 'pax', 'Peaxi162Scf00074g00125' => 'pax', 'Peaxi162Scf00102g01717' => 'pax', 'Peaxi162Scf00158g00052' => 'pax', 'Peaxi162Scf00158g00061' => 'pax', 'Peaxi162Scf00158g00067' => 'pax', 'Peaxi162Scf00158g00413' => 'pax', 'Peaxi162Scf00382g00043' => 'pax', 'Peaxi162Scf00390g10026' => 'pax', 'Peaxi162Scf00618g00058' => 'pax', 'Peaxi162Scf00904g00035' => 'pax', 'Peaxi162Scf01012g00013' => 'pax', 'Peaxi162Scf01553g00014' => 'pax', 'PGR031G0427' => 'pgr', 'PGR031G3394' => 'pgr', 'PGR031G3682' => 'pgr', 'PGR042G2011' => 'pgr', 'PGR042G2829' => 'pgr', 'PGR044G1399' => 'pgr', 'PGR119G0142' => 'pgr', 'PGR142G3569' => 'pgr', 'PGSC0003DMG400000091' => 'stu', 'PGSC0003DMG400002350' => 'stu', 'PGSC0003DMG400005631' => 'stu', 'PGSC0003DMG400012305' => 'stu', 'PGSC0003DMG400014541' => 'stu', 'PGSC0003DMG400015880' => 'stu', 'PGSC0003DMG400022695' => 'stu', 'PGSC0003DMG400030472' => 'stu', 'PGSC0003DMG400034583' => 'stu', 'PGSC0003DMG400036493' => 'stu', 'PGSC0003DMG400036561' => 'stu', 'PGSC0003DMG400038932' => 'stu', 'PGSC0003DMG400038949' => 'stu', 'PGSC0003DMG400040856' => 'stu', 'PGSC0003DMG400046911' => 'stu', 'PGSC0003DMG400047149' => 'stu', 'Phvul.002G162500' => 'pvu', 'Phvul.002G295700' => 'pvu', 'Phvul.002G315900' => 'pvu', 'Phvul.003G035500' => 'pvu', 'Phvul.006G080000' => 'pvu', 'Phvul.006G110200' => 'pvu', 'Phvul.007G027000' => 'pvu', 'Phvul.008G159400' => 'pvu', 'Phvul.008G246000' => 'pvu', 'Phvul.009G137000' => 'pvu', 'Phvul.010G035200' => 'pvu', 'Potri.001G094800' => 'ptr', 'Potri.002G167400' => 'ptr', 'Potri.003G136300' => 'ptr', 'Potri.008G120100' => 'ptr', 'Potri.010G125600' => 'ptr', 'Potri.012G032900' => 'ptr', 'Potri.013G158500' => 'ptr', 'Potri.014G094500' => 'ptr', 'Potri.015G023200' => 'ptr', 'Potri.015G054500' => 'ptr', 'Potri.019G131300' => 'ptr', 'Prupe.1G310100' => 'ppe', 'Prupe.2G183200' => 'ppe', 'Prupe.2G306400' => 'ppe', 'Prupe.3G019900' => 'ppe', 'Prupe.5G114100' => 'ppe', 'Prupe.5G220700' => 'ppe', 'Prupe.6G039700' => 'ppe', 'Prupe.7G060700' => 'ppe', 'Psat2g050560' => 'psa', 'Psat2g082880' => 'psa', 'Psat2g082920' => 'psa', 'Psat2g184960' => 'psa', 'Psat3g136200' => 'psa', 'Psat4g207840' => 'psa', 'Psat4g212120' => 'psa', 'Psat5g080040' => 'psa', 'Psat5g147080' => 'psa', 'Psat6g039160' => 'psa', 'Psat7g027880' => 'psa', 'Psat7g092760' => 'psa', 'PSO017G4295' => 'pso', 'PSO017G5122' => 'pso', 'PSO135G0629' => 'pso', 'PSO339G2164' => 'pso', 'PSO384G1832' => 'pso', 'PSO384G3530' => 'pso', 'QL01p024365' => 'qlo', 'QL01p043151' => 'qlo', 'QL02p031592' => 'qlo', 'QL04p058659' => 'qlo', 'QL04p059459' => 'qlo', 'QL09p011103' => 'qlo', 'QL93p0010_0079' => 'qlo', 'RcHm_v2.0_Chr1g0358681' => 'rch', 'RcHm_v2.0_Chr1g0360081' => 'rch', 'RcHm_v2.0_Chr1g0380021' => 'rch', 'RcHm_v2.0_Chr2g0166851' => 'rch', 'RcHm_v2.0_Chr4g0406661' => 'rch', 'RcHm_v2.0_Chr4g0435261' => 'rch', 'RcHm_v2.0_Chr5g0073531' => 'rch', 'RcHm_v2.0_Chr6g0276671' => 'rch', 'RcHm_v2.0_Chr7g0185311' => 'rch', 'RcHm_v2.0_Chr7g0195581' => 'rch', 'RcHm_v2.0_Chr7g0195661' => 'rch', 'Rhsim01G0243900' => 'rsi', 'Rhsim02G0240600' => 'rsi', 'Rhsim03G0198200' => 'rsi', 'Rhsim07G0007100' => 'rsi', 'Rhsim07G0085000' => 'rsi', 'Rhsim08G0135200' => 'rsi', 'Rhsim09G0108400' => 'rsi', 'Rhsim09G0108500' => 'rsi', 'Rhsim09G0203500' => 'rsi', 'Rhsim12G0083300' => 'rsi', 'Rhsim13G0058400' => 'rsi', 'Sabra01G0070700' => 'sbr', 'Sabra02G0144300' => 'sbr', 'Sabra03G0098100' => 'sbr', 'Sabra06G0113600' => 'sbr', 'Sabra12G0022100' => 'sbr', 'Sabra13G0127300' => 'sbr', 'Sabra14G0069100' => 'sbr', 'Sabra15G0017400' => 'sbr', 'Sabra19G0127900' => 'sbr', 'SalBow1G0973' => 'sbo', 'SalBow1G2339' => 'sbo', 'SalBow2G2078' => 'sbo', 'SalBow3G4609' => 'sbo', 'SalBow4G1334' => 'sbo', 'SalBow8G1121' => 'sbo', 'Sc01g0002970' => 'sci', 'Sc01g0010090' => 'sci', 'Sc04g0003530' => 'sci', 'Sc04g0006480' => 'sci', 'Sc04g0006500' => 'sci', 'Sc07g0009940' => 'sci', 'Sc11g0003310' => 'sci', 'Sc11g0003320' => 'sci', 'Sc14g0007510' => 'sci', 'Sc22g0005210' => 'sci', 'Sc23g0002350' => 'sci', 'Sc25g0000810' => 'sci', 'Sed0001080' => 'sed', 'Sed0001112' => 'sed', 'Sed0001298' => 'sed', 'Sed0002522' => 'sed', 'Sed0003298' => 'sed', 'Sed0003550' => 'sed', 'Sed0004110' => 'sed', 'Sed0005122' => 'sed', 'Sed0006038' => 'sed', 'Sed0011928' => 'sed', 'Sed0012392' => 'sed', 'Sed0014784' => 'sed', 'Sed0015584' => 'sed', 'Sed0019940' => 'sed', 'Sed0022996' => 'sed', 'Sed0025189' => 'sed', 'Sed0026969' => 'sed', 'Sed0027200' => 'sed', 'SEGI_32396' => 'sgi', 'SGA_v2.0_scaffold10G05262' => 'sas', 'SGA_v2.0_scaffold111G31443' => 'sas', 'SGA_v2.0_scaffold11G05718' => 'sas', 'SGA_v2.0_scaffold120G32995' => 'sas', 'SGA_v2.0_scaffold144G35839' => 'sas', 'SGA_v2.0_scaffold14G06857' => 'sas', 'SGA_v2.0_scaffold14G06859' => 'sas', 'SGA_v2.0_scaffold170G38757' => 'sas', 'SGA_v2.0_scaffold173G39099' => 'sas', 'SGA_v2.0_scaffold192G40586' => 'sas', 'SGA_v2.0_scaffold44G16773' => 'sas', 'SGA_v2.0_scaffold548G52847' => 'sas', 'SGA_v2.0_scaffold55G19731' => 'sas', 'SGA_v2.0_scaffold5G02983' => 'sas', 'SGA_v2.0_scaffold96G28986' => 'sas', 'SHI02438' => 'shi', 'SHI13142' => 'shi', 'Solyc01g008880.3' => 'sly', 'Solyc01g008890.4' => 'sly', 'Solyc01g014720.3' => 'sly', 'Solyc01g095500.3' => 'sly', 'Solyc03g007460.3' => 'sly', 'Solyc03g119580.1' => 'sly', 'Solyc04g007170.3' => 'sly', 'Solyc05g024230.3' => 'sly', 'Solyc06g051840.1' => 'sly', 'Solyc06g082590.1' => 'sly', 'Solyc08g081960.3' => 'sly', 'Sopen01g004380' => 'spe', 'Sopen01g009250' => 'spe', 'Sopen01g009300' => 'spe', 'Sopen01g009340' => 'spe', 'Sopen01g009430' => 'spe', 'Sopen01g039250' => 'spe', 'Sopen03g003410' => 'spe', 'Sopen03g038410' => 'spe', 'Sopen04g002250' => 'spe', 'Sopen04g008650' => 'spe', 'Sopen05g005260' => 'spe', 'Sopen06g017870' => 'spe', 'Sopen06g033990' => 'spe', 'Sopen08g030250' => 'spe', 'Sp1g20440' => 'spa', 'Sp1g22740' => 'spa', 'Sp1g36010' => 'spa', 'Sp2g00490' => 'spa', 'Sp2g15130' => 'spa', 'Sp4g28350' => 'spa', 'Sp5g01780' => 'spa', 'Sp5g18120' => 'spa', 'Sp5g23640' => 'spa', 'Sp5g26300' => 'spa', 'Sp6g06270' => 'spa', 'Sp6g15440' => 'spa', 'Sp7g21700' => 'spa', 'Sp7g25910' => 'spa', 'TAR369G0489' => 'tar', 'TAR371G0284' => 'tar', 'TAR371G0755' => 'tar', 'TAR374G0492' => 'tar', 'TAR374G1231' => 'tar', 'TAR375G1156' => 'tar', 'TAR622G1395' => 'tar', 'TAR625G0468' => 'tar', 'TAR629G1402' => 'tar', 'TAR629G2500' => 'tar', 'TAR633G0283' => 'tar', 'TAR636G1026' => 'tar', 'TAR636G3154' => 'tar', 'THA.LOC104800285' => 'tha', 'THA.LOC104805253' => 'tha', 'THA.LOC104806431' => 'tha', 'THA.LOC104808260' => 'tha', 'THA.LOC104813277' => 'tha', 'THA.LOC104813364' => 'tha', 'THA.LOC104814895' => 'tha', 'THA.LOC104817607' => 'tha', 'THA.LOC104819125' => 'tha', 'THA.LOC104821940' => 'tha', 'THA.LOC104823606' => 'tha', 'THA.LOC104825131' => 'tha', 'THA.LOC104825701' => 'tha', 'THA.LOC104826720' => 'tha', 'THA.LOC104827631' => 'tha', 'Thecc.01G347800' => 'tca', 'Thecc.02G355700' => 'tca', 'Thecc.03G034300' => 'tca', 'Thecc.03G192000' => 'tca', 'Thecc.03G292000' => 'tca', 'Thecc.07G151500' => 'tca', 'Thecc.09G364700' => 'tca', 'Thecc.10G098200' => 'tca', 'Thhalv10001561m.g' => 'esa', 'Thhalv10004526m.g' => 'esa', 'Thhalv10006118m.g' => 'esa', 'Thhalv10008928m.g' => 'esa', 'Thhalv10009619m.g' => 'esa', 'Thhalv10012016m.g' => 'esa', 'Thhalv10013898m.g' => 'esa', 'Thhalv10019247m.g' => 'esa', 'Thhalv10019722m.g' => 'esa', 'Thhalv10023946m.g' => 'esa', 'Thhalv10025693m.g' => 'esa', 'Thhalv10026857m.g' => 'esa', 'Thhalv10029132m.g' => 'esa', 'TPR.G24678' => 'tpr', 'TPR.G26276' => 'tpr', 'TPR.G27001' => 'tpr', 'TPR.G27809' => 'tpr', 'TPR.G33297' => 'tpr', 'TPR.G3402' => 'tpr', 'TPR.G5692' => 'tpr', 'TWI14G0798' => 'twi', 'TWI15G0459' => 'twi', 'TWI23G0159' => 'twi', 'TWI31G0025' => 'twi', 'TWI31G0307' => 'twi', 'TWI59G0363' => 'twi', 'TWI60G0733' => 'twi', 'TWI75G1354' => 'twi', 'TWI79G1494' => 'twi', 'TWI81G0255' => 'twi', 'TWI81G0827' => 'twi', 'unitig_0.g2460' => 'ugi', 'unitig_22.g5570' => 'ugi', 'unitig_22.g6555' => 'ugi', 'unitig_26.g10260' => 'ugi', 'unitig_27.g25191' => 'ugi', 'unitig_27.g25250' => 'ugi', 'unitig_37.g11979' => 'ugi', 'unitig_37.g12229' => 'ugi', 'unitig_46.g18537' => 'ugi', 'unitig_52.g17136' => 'ugi', 'unitig_52.g17722' => 'ugi', 'unitig_699.g19490' => 'ugi', 'unitig_699.g19491' => 'ugi', 'unitig_747.g21199' => 'ugi', 'unitig_749.g13178' => 'ugi', 'unitig_8.g3260' => 'ugi', 'unitig_8.g3979' => 'ugi', 'unitig_88.g27635' => 'ugi', 'vmacro01378' => 'vma', 'vmacro02868' => 'vma', 'vmacro10102' => 'vma', 'vmacro10554' => 'vma', 'vmacro11449' => 'vma', 'vmacro13198' => 'vma', 'vmacro22739' => 'vma', 'vmacro23246' => 'vma', 'VMungo0251G3364' => 'vmu', 'VMungo0331G1427' => 'vmu', 'VMungo0540G1343' => 'vmu', 'VMungo0540G2159' => 'vmu', 'VMungo0647G0636' => 'vmu', 'VMungo0720G1796' => 'vmu', 'VMungo1215G1687' => 'vmu', 'VMungo1215G2635' => 'vmu', 'VMungo1309G0702' => 'vmu', 'Zm00001eb119540' => 'zma', 'Zm00001eb145420' => 'zma', 'Zm00001eb157950' => 'zma', 'Zm00001eb309590' => 'zma', 'Zm00001eb338940' => 'zma', 'Zm00001eb359500' => 'zma' ) $gf_id = 'HOM05D000497' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000497' ) $data_identifier = 'HOM05D000497' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 13, 'ach' => (int) 13, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 7, 'ath' => (int) 12, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 9, 'bca' => (int) 46, 'bol' => (int) 24, 'bra' => (int) 21, 'can' => (int) 26, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 10, 'ccan' => (int) 5, 'cde' => (int) 9, 'cfa' => (int) 7, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 10, 'camsi' => (int) 7, 'dca' => (int) 14, 'din' => (int) 13, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 3, 'egr' => (int) 7, 'fan' => (int) 33, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 1, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 8, 'vpl' => (int) 10, 'lal' => (int) 14, 'lja' => (int) 12, 'lonja' => (int) 9, 'lsa' => (int) 13, 'mes' => (int) 11, 'mbi' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 10, 'egut' => (int) 8, 'ama' => (int) 13, 'nta' => (int) 20, 'nnu' => (int) 5, 'oeu' => (int) 17, 'osa' => (int) 4, 'pax' => (int) 14, 'pgr' => (int) 8, 'stu' => (int) 16, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppe' => (int) 8, 'psa' => (int) 12, 'pso' => (int) 6, 'qlo' => (int) 7, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 9, 'sbo' => (int) 6, 'sci' => (int) 12, 'sed' => (int) 18, 'sgi' => (int) 1, 'sas' => (int) 15, 'shi' => (int) 2, 'sly' => (int) 11, 'spe' => (int) 14, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 15, 'tca' => (int) 8, 'esa' => (int) 13, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 18, 'vma' => (int) 8, 'vmu' => (int) 9, 'zma' => (int) 6 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359500' $species_info = array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) $local_species = 'zma' $disabled = '' $selected = '' $num_hits = (int) 1